Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANPDALTITNRELPQVKSGSGTELALPADP-RRGGQLVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVL-RPPRSTLHRQECE-RLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVLEMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDD-AAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLT-DDGPVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETTLARGVGLH |
| 3I12 Chain:D ((3-353)) | ---------KLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKAGQWHVNDAEN---YLQNADDPAHIALRPSAISLAQVPGKHQHQLIN--AQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNRHAFSFAEVESRLGLPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVL--GNDNPQASTCGEIVL------NSEFY------IDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLIELALER----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217203 for 2897 contacts (-75.0/contact) +
2D Compatibility (PS) -38098 + (NN) -22598 + (LL) 1652
1D Compatibility (HY) -38400 + (ID) 7950
Total energy: -322597.0 ( -111.36 by residue)
QMean score : 0.579
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