Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASTALTVAIWIGVMLIGGIGSVLRFLVDRSVARRLARTFPYGTLTVNITGAALLGFLAGLALPKDAALLAGTGFVGAYTTFSTWMLETQRLGEDRQMVSALANIVVSVVLGLAAALLGQWIAQI
2KV5 Chain:A ((5-25))
------------------------------------------------------------------------------------------------------MSLVIAPIFVGLVLEMISRVL---
General information:
TITO was launched using:
RESULT:
Template:
2KV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8264 for 79 contacts (-104.6/contact) +
2D Compatibility (PS) -2095 + (NN) -1480 + (LL) 8712
1D Compatibility (HY) -4000 + (ID) 100
Total energy: -7227.0 ( -91.48 by residue)
QMean score : 0.022
(partial model without unconserved sides chains):
PDB file :
Tito_2KV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KV5-query.scw
PDB file :
Tito_Scwrl_2KV5.pdb
: