Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVAEGAYPYCRLTDQPLSVDEVLAAVSGPEQGGIVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRCEDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGAEWVGDRP
2QIE Chain:K ((9-136))
-----------------EPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGH--
General information:
TITO was launched using:
RESULT:
Template:
2QIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84532 for 889 contacts (-95.1/contact) +
2D Compatibility (PS) -14260 + (NN) -11372 + (LL) 1188
1D Compatibility (HY) -5600 + (ID) 2450
Total energy: -117026.0 ( -131.64 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2QIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIE-query.scw
PDB file :
Tito_Scwrl_2QIE.pdb
: