Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDD-AAAREPVLLWGDARVGNVLYRDF-Q-PVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVE-LGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
3SG8 Chain:A ((5-277)) | ----------------------TFDQVEKAIEQLYPDF--TINTIE--ISGEGNDCIAYEIN-----------RDFIFKFPKHSR-----GSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLL-------L-NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVL---DFREKINEDNKKIKKLLSRE----LKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEY----------GMEFV---SKILNHYKHKDIPTVLEKYRMKEKYWSFEKII--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146392 for 1995 contacts (-73.4/contact) +
2D Compatibility (PS) -28523 + (NN) -6388 + (LL) 6972
1D Compatibility (HY) -10800 + (ID) 1600
Total energy: -186731.0 ( -93.60 by residue)
QMean score : 0.317
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