Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
1W2G Chain:B ((1-209))
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQR----ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAP-----
General information:
TITO was launched using:
RESULT:
Template:
1W2G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116221 for 1929 contacts (-60.2/contact) +
2D Compatibility (PS) -23139 + (NN) -17320 + (LL) -480
1D Compatibility (HY) -24400 + (ID) 10200
Total energy: -191760.0 ( -99.41 by residue)
QMean score : 0.882
(partial model without unconserved sides chains):
PDB file :
Tito_1W2G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2G-query.scw
PDB file :
Tito_Scwrl_1W2G.pdb
: