Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWPAAAVDRVIKAYDVRGLVGEEIDESLVTDLGAAFARLMRTE-DARPVVIGHDMRDSSPSLADAFAAGVTGQGLDVVRVGLASTDQLYFASGLLD-CPGAMFTASHNPAAYNGIKMCRAAAKPVGADTGLTAIRDDLIAG--VAR--YDGTPGTIA-DQDVLVDYGAFLRSLVDTSGLRPLRVAVDAGNGMAGHTAPAVLGVIDSITLLPSYFELDGSFPNHEANPLDPANLVDLQAYVRDTGADIGLAFDGDADRCFVVDERGQPVSPSTVTALVAARELNRE--IGATIIHNVITSRAVPELVAERGGTPLRSRVGHSYIKALMAETGAIFGGEHSAHYYFRDFWGADSGMLAALHVLAALGEQSRPLSELTADYQRYESSGEINFTVVDSSACVEAVLKSFGNRIVSIDHLDGVTVDLGDDSWFNLRSSNTEPLLRLNVEGRSVGDVDAVVRQVSAEIAAQSAHAKAGP |
| 3PDK Chain:A ((23-466)) | --------GKYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKDTDRPKVIIGRDTRISGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDEQE-AEIEALLDKEVDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVEED-FSGLHIALDCAHGATSSLAPYLFADL-EADISTMGTSPNGMNINDGVGST---HPEVLAELVKEKGADIGLAFDGDGDRLIAVDEKGNIVDGDQIMFICAKYMKETGQLKHNTVVSTVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKKPLSELAGEMTKFPQLL-VNVRVTDK-KLALEN-EKI------KEIIRVVEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247572 for 3974 contacts (-62.3/contact) +
2D Compatibility (PS) -45989 + (NN) -14570 + (LL) 1372
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: -335159.0 ( -84.34 by residue)
QMean score : 0.454
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