Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRH--GDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
3SC6 Chain:E ((5-277)) | ----KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGD----RPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLY-GKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYG-TYHVSNTGSCSWFEFAKKIFSYANMKV-NVLPVSTEEF---AARPKYSIFQHNMLRLNGFLQMPSWEEGL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138903 for 2355 contacts (-59.0/contact) +
2D Compatibility (PS) -29829 + (NN) -19930 + (LL) 1440
1D Compatibility (HY) -24000 + (ID) 5200
Total energy: -216422.0 ( -91.90 by residue)
QMean score : 0.536
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