Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTCPCESSERNEPVSRVSGTNEVSDGNETNNPAEVSDGNETNNPAEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPVSRVSGTNEVSDGNETNNPAPV---TEKPLHPHEPHIEILRGQ--PTDQELAALIA----------VLGSISGSTPPAQPEPTR-WGLPVDQLRYPVFSWQ-R-------ITLQEMTHMRR |
| 4CUA Chain:A ((4-181)) | ----------QGANISDQWTGSELP-------LAFASDSNPSDPVSNVNDKLISYNNQPANRWT------NWNRSNPEASVGVLFGDSGILSKRSVDNLSVGFHEDHGVGAPKSYVIEYYVGKTVPTAPKNPSFVGNEDHVFNDSANWKPVTNLKAPAQLKAGEMNHFSFDKVETYAIRIRMVKADNKRGTSITEVQIFAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42429 for 1163 contacts (36.5/contact) +
2D Compatibility (PS) -16856 + (NN) -12125 + (LL) -52
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: 7596.0 ( 6.53 by residue)
QMean score : 0.175
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