Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHSAFTKSVDELREMAGGEE
3D55 Chain:A ((1-68))
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENARRLMEAVAR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3D55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18761 for 362 contacts (-51.8/contact) +
2D Compatibility (PS) -7357 + (NN) -1978 + (LL) 1156
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -38740.0 ( -107.02 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_3D55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D55-query.scw
PDB file :
Tito_Scwrl_3D55.pdb
: