Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSVSATTTDGLGLTGRGEGLAAIATALVVSLR
2UZH Chain:B ((5-148))
---LPRVGLGTDVHPIEAGRPCRLLCLEFDDADGCA--SDGDVAAHALCDALLSAAGLGDLGTIFGTDRPQWRGASGADMIRHVRGLVENAGFVIGNATVQVIGNRPKVGPRREEAQQVLSELVGAPVSVSATTTDGLGLTGRGEGL------------
General information:
TITO was launched using:
RESULT:
Template:
2UZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107446 for 1073 contacts (-100.1/contact) +
2D Compatibility (PS) -15816 + (NN) -14330 + (LL) 1760
1D Compatibility (HY) -12400 + (ID) 5350
Total energy: -153582.0 ( -143.13 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_2UZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UZH-query.scw
PDB file :
Tito_Scwrl_2UZH.pdb
: