Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNTNPVAAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIGEEV
2A5V Chain:C ((10-210))
---TNPVAAWKALKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIDSAVLGSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGRRDGLSRVDEFEQRHVHETVAILMARSSAISERIAGGSLAIVGVTYQLDDGRAVLRDHIGNIG---
General information:
TITO was launched using:
RESULT:
Template:
2A5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158531 for 1664 contacts (-95.3/contact) +
2D Compatibility (PS) -21503 + (NN) -6628 + (LL) 388
1D Compatibility (HY) -27200 + (ID) 10050
Total energy: -223524.0 ( -134.33 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2A5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A5V-query.scw
PDB file :
Tito_Scwrl_2A5V.pdb
: