Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPRCQ----KVLE-----GTGFVISPD-RVMTNAHVVAGSNNVTVYAGDKP-FEATVVSYDPSVDVAILAVP----HLPPPPLVFAAEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGV---VFGAAIDDAETGF---VLTAGEVAGQLAKIGA-TQPVGTGACVS |
| 3QO6 Chain:B ((28-234)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSAD-LLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRP---IQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPI------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86055 for 1432 contacts (-60.1/contact) +
2D Compatibility (PS) -20603 + (NN) -11655 + (LL) 16956
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -117157.0 ( -81.81 by residue)
QMean score : 0.440
|
|
|