Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQ--------PNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAA-EHGYP-TVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPAANQEPEHG |
| 3CKJ Chain:A ((45-267)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------KAGRTISVVLPALDEEDTIGSVIDSISPLVDG--LVDELIVLDSGSTDDTEI-RA----VAA--GARVVSREQALPEVPIRPGKGEALWRSLAAS----RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRP--------------------GRVTELVAR-PLLA----------ALRPELGCILQPLGGEYAATRELLTSVPFAP-G--YGVEIGLLVDTFDRLGLDAIAQVNLGVREHRNRP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80897 for 1600 contacts (-50.6/contact) +
2D Compatibility (PS) -20763 + (NN) -3317 + (LL) 30160
1D Compatibility (HY) -800 + (ID) 950
Total energy: -76567.0 ( -47.85 by residue)
QMean score : 0.248
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