Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGIDA
3QF3 Chain:F ((3-132))
-STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRIDELRRAEGID-
General information:
TITO was launched using:
RESULT:
Template:
3QF3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57933 for 785 contacts (-73.8/contact) +
2D Compatibility (PS) -15072 + (NN) -12254 + (LL) 352
1D Compatibility (HY) -14800 + (ID) 6500
Total energy: -106207.0 ( -135.30 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_3QF3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QF3-query.scw
PDB file :
Tito_Scwrl_3QF3.pdb
: