Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
1U9O Chain:B ((42-235))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGEN-
General information:
TITO was launched using:
RESULT:
Template:
1U9O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93449 for 1374 contacts (-68.0/contact) +
2D Compatibility (PS) -21487 + (NN) -17185 + (LL) 1172
1D Compatibility (HY) -24800 + (ID) 9700
Total energy: -165449.0 ( -120.41 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1U9O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U9O-query.scw
PDB file :
Tito_Scwrl_1U9O.pdb
: