Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
4J7J Chain:B ((4-88))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRAEFIQSKQAMQQYIPILEGISTDLKRIADKFRN---------------
General information:
TITO was launched using:
RESULT:
Template:
4J7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6790 for 477 contacts (14.2/contact) +
2D Compatibility (PS) -9103 + (NN) -1397 + (LL) 1188
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -7822.0 ( -16.40 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4J7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J7J-query.scw
PDB file :
Tito_Scwrl_4J7J.pdb
: