Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIP--------EKPCVILSKHQSTWETFFLSGFFE--------PLSQVLKRELLYVPFFGWALALLKPIAIDRSQP-----------KLALKQLAKQGDECL-KKGAWVLIFPEGTRIPVGQ------MGKFSRG----GTALAVNAGLP--VLPIAHNAGQYWPKAGW-AKYPGTIQVVIGPAMHAEGEG------PRAIAELNQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
1IUQ Chain:A ((109-349)) | ------------------------------------------------------------GNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPP--RVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73330 for 1379 contacts (-53.2/contact) +
2D Compatibility (PS) -19871 + (NN) -6475 + (LL) 6456
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -99820.0 ( -72.39 by residue)
QMean score : 0.414
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