Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQTTPAVRTFQDLILALQNYWAEQGCVVLQPYDMEV---GAGTF-----HTA------------TFL---------RAIG--PETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVV--LKP-NPENFQELYLGSLKAIGIDPLVHDIRFVED--NWESPTLGAWGLGWEIWLNG---MEVTQFTYFQ-QVG-GIECYP---VTGEITYGLERLAMYLQGVDSVYDLVWTDGPFGKVTYGDVFHQNEVEQSTFNFEHANVPKLFELFDFYESEANRLIALELPLPTYEMVLKASHTFNLLDARRAISVTERQRYILRVRTLARAVAQSYLQARARLGFPMATPELRDEVLAKLKEAE |
| 3PCO Chain:A ((109-315)) | ----------VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQ-----THTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEED--LQIRFRPSYFPFTEP-----SAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89884 for 1151 contacts (-78.1/contact) +
2D Compatibility (PS) -17528 + (NN) -6969 + (LL) 11040
1D Compatibility (HY) -8400 + (ID) 1400
Total energy: -113141.0 ( -98.30 by residue)
QMean score : 0.275
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