Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVK-HPDLTQLPTGSVVTGQVQDLPIDAPI---LQMEVVRVDAEG----VGLRFLSEA---------------------- |
| 1YLN Chain:A ((23-248)) | TVSTINSTDALAMVEHSELTLSITTPVGTKFVCRTPFIGTHTDKFLLVEMPKISADDLQYFFQEGFWMNIRAISPRGEGALIHFRSQLMHILQEPVPMAFLSIPNTMQVSQLRKEPRFELNLAGKVLFDE-HRGDCELRDLSRSGCRFITPPLGKTYQVGDLVALEIFSDLRGTKTFPPLTGKICNLQRSLHHARYGLEFNEEGRNNAKNLLAQLKFNGTKLTLNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42333 for 524 contacts (-80.8/contact) +
2D Compatibility (PS) -9128 + (NN) -1263 + (LL) 132
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -55842.0 ( -106.57 by residue)
QMean score : 0.433
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