Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLF-VPLYGMLLNGILKMLPGRPQSNA
1Q3I Chain:A ((1-214))
-----------------MMTVAHMWFDNQIHEADTTTFDKRSPTWTALSRIAGLCNRAVFKRDTAGD---ASESALLKCIELSCGSVRKMRDRNPKVAEISYQLSIHEREDNPQSHVLVMKGAPERILD-----RCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHHH-
General information:
TITO was launched using:
RESULT:
Template:
1Q3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -222074 for 1523 contacts (-145.8/contact) +
2D Compatibility (PS) -19514 + (NN) 6817 + (LL) 2076
1D Compatibility (HY) 2400 + (ID) 750
Total energy: -231045.0 ( -151.70 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1Q3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q3I-query.scw
PDB file :
Tito_Scwrl_1Q3I.pdb
: