Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAYTLFNTPTKIARVREPAYLT-RTGLFDNEAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVGIKAYYGGPLVGQELRQLREHMPNVDTRVAAIYRRNRPIIPQGDTVIEADDEVFFIAAKAHIRAVMGEMRRLDDSYKRIIIAGGGNVGERLAEAIESRYQVKIIERSPLRCRHLSDTLDSTIVLNGSASDRDLLLEENIGETDVFLALTNDDEANIMSSLLAKRLGASKVMTLINNPAYVDLVQGGEIDIAISPQLATIGTLLAHVRRGDIESVHSLRRGAAEAIEVVAHGDAKSSKVIGRSINEIKLPPGTTIGALVRDEEVLIAHGDTRIESGDHVLLFLVDKKYIRDVERLFQAGLTFF |
4J9U Chain:H ((1-453)) | MKIIILGAGQVGGTLAENLVGENNDITIVDNNADRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRVARIRSPEYLAEKEALFKSGAIPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEQKVSLVAVKAYYGGPLVGNALSALREH---IDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERDYQRAEKLSEQLENTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAVAHGDETTSKVVGRAIGDIKLPPGTTIGAVVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVEALFQP----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -300965 for 3838 contacts (-78.4/contact) +
2D Compatibility (PS) -48448 + (NN) -18345 + (LL) 308
1D Compatibility (HY) -54000 + (ID) 15050
Total energy: -436500.0 ( -113.73 by residue)
QMean score : 0.519
|
|
|