Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLED--LPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
1HRU Chain:A ((6-188))
--QRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFP-VVPGETGGRLNPSEIRDALTGELFR--
General information:
TITO was launched using:
RESULT:
Template:
1HRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121330 for 1447 contacts (-83.8/contact) +
2D Compatibility (PS) -19550 + (NN) -12941 + (LL) 560
1D Compatibility (HY) -14400 + (ID) 4600
Total energy: -172261.0 ( -119.05 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1HRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HRU-query.scw
PDB file :
Tito_Scwrl_1HRU.pdb
: