Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGWSDIAVTNATAAFLLESLGYQVKIDTL-SVPIIYGGLRDGQVDAFLGGWMPAHQDYHDKFVASGQVERLGRNLDGTRFTLAVPRYVWD-AGVHRFEDLAA--QGQRFN------RKLYGIGSGAPANQSIQKMIDANQFGLG-DWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIRH----DLRYLEGGEQ----------------YFG-DRGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSDALEGT---ATPASATRAWLKANPRVLEAWLQGVTSRDGGDALAAVRGQP |
1R9L Chain:A ((3-306)) | ----------------------LPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQL--AAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102970 for 2257 contacts (-45.6/contact) +
2D Compatibility (PS) -28953 + (NN) -9872 + (LL) 2448
1D Compatibility (HY) -7200 + (ID) 2350
Total energy: -148897.0 ( -65.97 by residue)
QMean score : 0.513
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