Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKANGVPAYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
3BZQ Chain:A ((12-31))
---------------------------TLDDVKTSLEDAGVLGMTVSEIQGYGRDFVPKVRIEVVVDDSIVDKVV
General information:
TITO was launched using:
RESULT:
Template:
3BZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3005 for 75 contacts (-40.1/contact) +
2D Compatibility (PS) -2237 + (NN) -1623 + (LL) 2740
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -5875.0 ( -78.33 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3BZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BZQ-query.scw
PDB file :
Tito_Scwrl_3BZQ.pdb
: