Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPERVTGDAARQKYVWKEYENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGYYTCIYEFFADASGRVVDATARGECR |
3VQ1 Chain:D ((75-120)) | ------------------------------------------------------------------KEVLCHGHDDDYSFCRALKGETVNTSIPFSFEGILFPKGHYRCVAEAIAGDTEEKLFCLNFTIIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2759 for 144 contacts (19.2/contact) +
2D Compatibility (PS) -4890 + (NN) -1358 + (LL) 5468
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 29.0 ( 0.20 by residue)
QMean score : 0.310
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