Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKATYSMLSQVTFPLAEAGYYVVPVALADETFRQNGLTSAGDVHQVSPAKLREIYGADAALYVTVSDYGTRYMVISSATIVTASAKLVDLRSGTTLWTGSATASSEEGNGGNNGGLVGMLITAAVKQIINSSVEDAGYPIAGMTSARLLSAGQPGGLLYGPRSPRYGSD |
3MAB Chain:A ((15-46)) | --------------------------VLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSSVCMSELYALEGAVQGIRWHGLDEAKKIELKKFHQSLEG---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MAB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5307 for 173 contacts (-30.7/contact) +
2D Compatibility (PS) -3518 + (NN) -403 + (LL) 6724
1D Compatibility (HY) -1600 + (ID) 100
Total energy: -4204.0 ( -24.30 by residue)
QMean score : 0.732
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