Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHCFANGNKRTAAAAATVFLLLNGIELTGPAQDFVDIMVALVTREASVQDLEDWMFYWHRPFDA----YNLPDSDAFERMVARLGIG
2V6Z Chain:M ((35-97))
-----------------LSAFKLRGLLLRG---EAIKYLTEALQSI-SELELEDKLEKIINAVEKQPLSSNMIERSVVEAAVQESS--
General information:
TITO was launched using:
RESULT:
Template:
2V6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42025 for 373 contacts (-112.7/contact) +
2D Compatibility (PS) -6324 + (NN) -1692 + (LL) 1380
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -50411.0 ( -135.15 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_2V6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V6Z-query.scw
PDB file :
Tito_Scwrl_2V6Z.pdb
: