Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARD-GRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA
2HG6 Chain:A ((24-85))
----------KTGRYIVRFSEDSFGMDVADDSITPTSEFVWSSVRDDVMRLGREQLQILLEQNINERLNIGEPLLVYLRRQDLPEITAQRQLR------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20694 for 280 contacts (-73.9/contact) +
2D Compatibility (PS) -6272 + (NN) -1449 + (LL) 6656
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -26359.0 ( -94.14 by residue)
QMean score : 0.065
(partial model without unconserved sides chains):
PDB file :
Tito_2HG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HG6-query.scw
PDB file :
Tito_Scwrl_2HG6.pdb
: