Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDLTLHYLYDPLCGWCYGASPLLAAACEV-T---GLDVRLHGGGMMTDANRQ---PV----------GAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRI-AERPVLLELGAELGLG-EGFAEAFDACSGE-PLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA |
| 3GL5 Chain:A ((2-235)) | --HMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLGAQAAAEGLAYRTRD--------RDHGSTFDLHRLLHLAKERG-RHEALLDAFYRGNFADERSVFNDDERLVELAVGAGLDAEEVRAVLA---DPAAYADEVRADEREAAQLGATGVPFFVLDRA---YGVS---GAQPAEVFTQALTQAWGERTPLKLID---AEACGPDGCA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128069 for 1529 contacts (-83.8/contact) +
2D Compatibility (PS) -22807 + (NN) -9226 + (LL) 640
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -165012.0 ( -107.92 by residue)
QMean score : 0.342
|
|
|