Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHSSGGVDMKKTASAVWQGGLKDGKGTLSTESGALKDN-PYGFNTRFEGAPGTNPEELIGAAHAGCFSMALSMMLGEAGLTAERIETRAEVTLDKQSDGFAITAVHLVLRARVPGADAQTFEQIANKAKAGCPVSKVLNAKISLDASLDG
1QWI Chain:A ((2-142))
---------TIHKKGQAHWESDIKRGKGTVSTESGVLN-QQPYGFNTRFEGEKGTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS
General information:
TITO was launched using:
RESULT:
Template:
1QWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10157 for 900 contacts (-11.3/contact) +
2D Compatibility (PS) -14482 + (NN) -1357 + (LL) 144
1D Compatibility (HY) -1200 + (ID) 2250
Total energy: -29302.0 ( -32.56 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_1QWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QWI-query.scw
PDB file :
Tito_Scwrl_1QWI.pdb
: