Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPNSVSYYRSASYSHVGMVRKVNEDASLDAP---EAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSL---PAYVGALRTGLAQVNERVRQEAGLRGVSVMGSTLVLLAARGNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSH-SDPYAVVRSLVHLGLTRGAPDNITALVVRAF |
| 2PK0 Chain:A ((2-245)) | ----RKKYMEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144558 for 1996 contacts (-72.4/contact) +
2D Compatibility (PS) -24640 + (NN) -3291 + (LL) 180
1D Compatibility (HY) -8400 + (ID) 3200
Total energy: -183909.0 ( -92.14 by residue)
QMean score : 0.491
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