Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSWNNRVVWSEGMFLRPQHFQQH---DRYLET-------------LVDGRCRSLLAGGWGFSELKLDDALLTQGKLA--IVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEG------------EALGGARY---------VSQVQEVRDDNAAFESRAPVALGSQAFRLLTERD----------GLGEYAAVGVARVREKRADQALSLDEDYL--PPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEEYPVYNHDDLAASFAPVMLALRQALATVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNAS--FVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNLQLPGI--GLLPMPVAPRQIPYHAGSTYFELDR-----------------GSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG---------------------- |
| 5C8T Chain:B ((2-526)) | AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDAVGT---NLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHV----------ASCDAIMTRCLAVHECFVKRVDWSVEYPIIGDELRVNSACRKVQHMVVKSALLADK-FPVLH--DIGNPKAIKCVPQAEVEWKFYDAQ----PCSDKAYKIEELFYSYATHHDKFTDGVCLFWNCNVD------RYPANAIVCRFD-TRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNMMISAGFSLWIYKQFDTYNLWNTFTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77054 for 2979 contacts (-25.9/contact) +
2D Compatibility (PS) -42414 + (NN) 2160 + (LL) 1168
1D Compatibility (HY) -12400 + (ID) 3850
Total energy: -132390.0 ( -44.44 by residue)
QMean score : 0.103
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