Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHLTEYARE--------RQRNVNDATFKRFMDVFHHRLLTLFYRAWAEA-------RPEISHDRIDDDYWSARLAALSGRGMPSLRGREPLA-----DTARYYYTGHLAAQTRY-PDGLRVILAEYFEVPVAVEEYVGQWLELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDWDVNLVLQRHEVPPLGL-QGGGRLGF---------NTWL---GDP-GQDARDLLLARQYATARPHEHKEKEHE-- |
| 4USR Chain:A ((1-357)) | --GPAMPPILDVIVIGGGQAALTTAYFLRRTSLSYLLLDEQPGPGGAWLHAWDSLRL-------FSPAAWSSIA----------GWPMPSPTEPGNPTRNDVIDYLRRYEDRYQFPIQRPVRVDTVTRLDDLWRVQAGDQQWLARAVISATGTWSKPFIPPYEGRELFQGAQIHSAHYRTPAPFAGKRVMVVGGGNSGAQVLAELSSVSETLWITQEPPAFLPDEVDGRVLFERATARWKAQQEGRSIDEPAGGFG-DIVMVPPVREARERGVLVAER----PFARFTETG---VEWADGRRENL-DAVIWCSGFRPALDHLRELGVVEADGKVQVEDTRVVKQPNLWLVGYGDWTGMASATLIGVTRTARSTADQVVQALTATP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46216 for 2424 contacts (-19.1/contact) +
2D Compatibility (PS) -33296 + (NN) -4095 + (LL) 1352
1D Compatibility (HY) -5200 + (ID) 3300
Total energy: -90755.0 ( -37.44 by residue)
QMean score : 0.125
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