Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
2EHB Chain:D ((2-127))
EGPLMMNAFEMITLSQGLNLS-ALFDRRQDFVKRQTRFVSRRE--------PSEIIANIEAVANSMGFKSHTRNFKTRLEGLS--------SIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWR-
General information:
TITO was launched using:
RESULT:
Template:
2EHB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22557 for 829 contacts (-27.2/contact) +
2D Compatibility (PS) -13899 + (NN) -8540 + (LL) 1280
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -47966.0 ( -57.86 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_2EHB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EHB-query.scw
PDB file :
Tito_Scwrl_2EHB.pdb
: