Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGARGQVFCMGSGDIHEEQLPDGDDAIGGRGNMRGVACI-DGVAYACGMDRQVYRRFDE-NDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDGEIWQYDGKRW-----------QPRES---PTNLILTAICCAEDGSVYACGQ-AGTLLRGRN--DHWEIIAQ-DD-VDEDLWSLAWF-DGALYVSSATAVYTLVGGHLK--EVDFGDEQPQRCFHLSAADGVLWSIAAKDIFSFDGQQWTRID |
| 3OTT Chain:A ((374-585)) | -------------------------------------------------------------------------------------------------------------RIRHIYEDKEQQLWIATD-GSINRYDYATRQFIHYNIVDNT----YNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGGVMRINP--ESQQSISFGS---NEILSMTCVKNSIWVSTTNGLWIIDRKTMDARQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123159 for 1340 contacts (-91.9/contact) +
2D Compatibility (PS) -19573 + (NN) -5730 + (LL) 6396
1D Compatibility (HY) -8000 + (ID) 1050
Total energy: -151116.0 ( -112.77 by residue)
QMean score : 0.341
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