Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGDDALIGRMRACLAASPEARRGFAAALGWLDWDQARPWVERLLASPEPLFRAIGLAACGMHRHDPGPALLSALGHADPAVLARAARTAGELRRRDLMANIRAYRAHDDPSLRFWANWATAQMGDE-----EALGPLRAFAGQPG-PFQLPATMVLLAWQPR----D---TSMAWIRQLMQ-A--ADTRRIGIQATGLFGDPVA----VPWLIQQMRDE--SLARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF |
| 2VGL Chain:A ((307-433)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLHSKFHLCSVPTRALLLSTYIKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45390 for 692 contacts (-65.6/contact) +
2D Compatibility (PS) -11800 + (NN) -9994 + (LL) 16004
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -56180.0 ( -81.18 by residue)
QMean score : 0.321
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