Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
| 1XKM Chain:B ((1-25)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------NLVSGLIEARKYLEQLHRKLKN-CKV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1839 for 90 contacts (20.4/contact) +
2D Compatibility (PS) -2667 + (NN) 83 + (LL) 12412
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 9417.0 ( 104.63 by residue)
QMean score : 0.107
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