Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MGGFMQYSQRLGEAGRNDRRSMR---GAFRPGLLPTLVV--LGLLPVLLWLGTWQLQRADEKRALLASYEA----RRGAEPVSPGQLEGLRDPAYVRV------RLHGRFDERHTLLLDNRLRNGQAGVEVLQPFYDQASGLWLLVNRGWVAWTDRR---SPPTLETPDRVL---------LLDAWTYLPPPG-----GLHLADAPAGGWP---RLVTQLDIPALWQAFGRAGLPWEIRL--------EPGDASFDT-------DWPLVSMPPERHTG-------------------YAVQWFALATALLAL-YLYLGVRRAREKNHESRDSDA |
| 4CBH Chain:A ((27-507)) | SATDLTEMVKKITTMNRGEFRQITLATGAGKTTELPRSVIEEIGRHKRVLVLIPLRAAAESVYQYMRQKHPSIAFNLRIGEMKEGDMATGITYASYGYFCQMSQPKLRAAMVEYSFIFLDEYHCATPEQLAIMGKIHRFSENLRVVAMTALKCEKRIRLSPKMPFIVTGLKRMAVTKDYHYDLLQAQRYGIEDGINITKSFREMNYDWSLYEEDSLMITQLEI--LNNLLISEELPMAVKNIMARTDHPEPIQLAYNSYETQVPVLFPKIRNGEVTDTYDNYTFLNARKLGDDVPPYVYATEDEDLAVELLGLDWPDPGNQGTVEAGRALKQVVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CBH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66128 for 1842 contacts (-35.9/contact) +
2D Compatibility (PS) -27917 + (NN) -10836 + (LL) 4
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -115227.0 ( -62.56 by residue)
QMean score : 0.191
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