Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGR--------SQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGREASRAGHALAAS-GELPADFANL-VRQDYPRLQRYGLDPA-LY-DKA----GGGERPLLWVVDPHGNLVLRYDAKA--NGKKLLKDVQLLLKLSHIG |
| 1JFU Chain:A ((31-180)) | ---------------------------------------------------LTMASAPLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVP-CRKEMPALDELQGKLSG--PNFEVVAINIDTRDPEK-PKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49754 for 955 contacts (-52.1/contact) +
2D Compatibility (PS) -14065 + (NN) -5896 + (LL) 4556
1D Compatibility (HY) 800 + (ID) 850
Total energy: -65209.0 ( -68.28 by residue)
QMean score : 0.526
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