Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVV-PLTDGTLLLETPEG--DRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK
3LAG Chain:A ((3-95))
---TVAAKSEIQIDNDEVRVTEWRLPPGSATGHHTHGMDYV-VVPMADGEMTIVAPDGTRS-LAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIELK
General information:
TITO was launched using:
RESULT:
Template:
3LAG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26696 for 662 contacts (-40.3/contact) +
2D Compatibility (PS) -9967 + (NN) -1178 + (LL) 300
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -45041.0 ( -68.04 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3LAG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LAG-query.scw
PDB file :
Tito_Scwrl_3LAG.pdb
: