Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRLPIIDIAPLYGADRGAWNDVARRIDQACREWGFFYIAGHPLPAARFEALLAAAREFFALPVEEKLKIDIT-RSRNHRGYGAIATEQLDPALPSDFKETFDMALHLPAEHPDVRAGKSFYGPNRHPD-LPGWEALLEGHYADMLALARTVLRALAIALGIEEDFFDRRFE---QPVSVFRLIHYPPASARQSADQPGAGAHTDYGCVTLLYQDAAGGLQVQNRQGEWIDAPPIDGTFVVNIGDMMARWSNDRYRSTPHRVISPRGVHRYSMPFFAEPHMDT-EIRCLPGCFDADNPPKYPPTTCGDWLTSRFAQTYAYRRGETA |
| 1GP6 Chain:A ((45-344)) | -PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNA--SGQLEWEDYFFHLAYPE----------EKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQP--ELALGVEAHTDVSALTFILHNMVPGLQLFYE-GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194740 for 2317 contacts (-84.0/contact) +
2D Compatibility (PS) -32979 + (NN) -28797 + (LL) 988
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -273128.0 ( -117.88 by residue)
QMean score : 0.504
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