Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR
1H1T Chain:B ((4-158))
--RAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA-
General information:
TITO was launched using:
RESULT:
Template:
1H1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120471 for 1218 contacts (-98.9/contact) +
2D Compatibility (PS) -16879 + (NN) -9379 + (LL) 192
1D Compatibility (HY) -19200 + (ID) 4650
Total energy: -170387.0 ( -139.89 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1H1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H1T-query.scw
PDB file :
Tito_Scwrl_1H1T.pdb
: