Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQQHDTHSKAIGYLLWIFGFTGSHRFYYGKPITGTIWFFTFGLFFIGW--------IIDLFLIPSMDREADRRFQGGNLDYNVAWILLTFLGVLGVHRMYMGKWITGIIYLFTGGLFFLGVLYDFWTLNGQVSERNGPQRI
4IC9 Chain:A ((4-133))
GQGRDWKMAIKRCSNVAVGVGGKSKKF----GEGNFRWAIRMANVSTGREPGDIPETLDQLRLVICDLQERREKF-GSSKEIDMAIVTLKVFAVAGLLNMTVSTAAAAENMYSQMGL-------DTRPSMKEAGGKEEGPPQ
General information:
TITO was launched using:
RESULT:
Template:
4IC9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92276 for 827 contacts (-111.6/contact) +
2D Compatibility (PS) -12459 + (NN) 3927 + (LL) 924
1D Compatibility (HY) 2000 + (ID) 850
Total energy: -98734.0 ( -119.39 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_4IC9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IC9-query.scw
PDB file :
Tito_Scwrl_4IC9.pdb
: