Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSPNGSLKFASQAVAKPYFVFALILFVGQILFGLIMGLQYVVGDFL------FPAIPFNVARMVHTNLLIVWLLFGFMGAAYYLVPEESDCEL-YSPKLAWILFWVFAAAGVLTILGYLLVPYAGLARLTGNELWPTMGREFLEQPTISKAGIVIVALGFLFNVGMTVLRGRK-----TAISMVLMTGLIGLALLFLFSFYNP--ENLTRDKFYWWWVVHLWVEGVWELIMGAILAFVLVKITGVDREVIEKWLYVIIAMALISGIIGTGHHYFWIGVPGYWLWLGSVFSALEPLPFFAMVLFAFN---TINRRRRRDYPNRAVALWAMGTTVMAFLGAGVWGFMHTLAPVNYYTHGTQLTAAHGHMAFYGAYAMIVMTIISYAMPRLRGIGEAMDNRSQVLEMWGFWLMTVAMVFI-TLFLSAAGVLQVWLQRMPADG--AAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSFRRGKAAA |
| 3AYF Chain:A ((294-763)) | ----RRQPLTPSQVKAGKYFVVVSALFFVQTMFGALLAHYYTEPDSFFGINWIYDILPFNIAKGYHLQLAIFWIATAWLGMGIFIAPLVGGQEPKKQGLLVDLLFWALVVLVGGSMIGQWLGVNGYLGN--EWFLLGHQGWEYIELGRIWQIILVVGMLLWLFIVFRGVKRGLKRESDKGGLIHLLFYSAIAVPFFYIFAFFIQPDTNFTMADFWRWWIIHLWVEGIFEVFAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHYYYNGSPEVWIALGAVFSALEVIPLTLLILEAYEQYKMMRDGGA-NFPYKATFWFLISTAIWNLVGAGVFGFLINLPAVSYFEHGQFLTPAHGHAAMMGVYGMFAIAVLLYSLRNIVK--P--EAWNDKWLKFSCWMLNIGLAGMVVITLLPVGILQMKEAFIHGYWASRSPSFLQQ-DVVQNLLLVRAVPDTIFLIGVVALLVFAIKALFHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -499384 for 3774 contacts (-132.3/contact) +
2D Compatibility (PS) -47042 + (NN) -25681 + (LL) 1080
1D Compatibility (HY) -45600 + (ID) 6500
Total energy: -623127.0 ( -165.11 by residue)
QMean score : 0.300
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