Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLWPATLIGAGAGWALASIPGALLGGLLGQLLDRRLRLESWRGLLARLRGRAVNDEDDLLFQLLGYLAKSGGRVEEMHIRQAREEMALRKLDRRAQRRAIASFGKGKAGIAHLQAEVARLKGERAEAVLLACWRMAWAGGVLSQSARQLVLQWGRWLGWSAERTERLSARVMPKRTRAVARDSYREALLLLGVEAGSEPALIKRAYRKLISQHHPDKLAGAGASVERVRAATEKTRELQAAYALVREREGFR |
4J7Z Chain:E ((4-60)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDYYAILGVPRNATQEEIKRAYKRLARQYHPD--------VNKSPEAEEKFKEINEAYAVLSDPEKRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J7Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12969 for 339 contacts (-38.3/contact) +
2D Compatibility (PS) -6142 + (NN) -2811 + (LL) 15644
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -10578.0 ( -31.20 by residue)
QMean score : 0.745
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