Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
4EQG Chain:B ((18-128))
-DTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
General information:
TITO was launched using:
RESULT:
Template:
4EQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92325 for 766 contacts (-120.5/contact) +
2D Compatibility (PS) -12342 + (NN) -9445 + (LL) 208
1D Compatibility (HY) -11200 + (ID) 2750
Total energy: -127854.0 ( -166.91 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_4EQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EQG-query.scw
PDB file :
Tito_Scwrl_4EQG.pdb
: