Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----M-QFFLRYAYAPLFWSGFI---GLATWQV---GYRQASHAWLVALFLGALGL-SFLAERRLPYQPRWNRPHA-DRLRDVLHAS--------------------VNESLNALGILALPLL-AGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASH-RSALLWRLHAVH-HS-VQRLYGFN---------------GLMKHPLHLGLEALGGTLPLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLR--------HV-FAWAPLHRLHHIR----YGRAGDVNFALFFSV----WDR----------------LLGTALHRPDYRLDS-TDMGI-GDQ-------PD--------YPRDYAGQLLAPFRDL-PRSRHVPQPPEGL-GRSAGQA---------- |
| 4QT9 Chain:A ((19-432)) | LSDDALMDTVQRRTFL-YFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFPIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEGIELHLRYQGTEAGPLFWAQYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIA-VMIENYRTGLLWKLFMSHPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194516 for 2263 contacts (-86.0/contact) +
2D Compatibility (PS) -30817 + (NN) -1708 + (LL) -216
1D Compatibility (HY) -6000 + (ID) 2850
Total energy: -236107.0 ( -104.33 by residue)
QMean score : ?
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