Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSATRTYGWGATATTPATITGIPSTTAPAT
1UVQ Chain:C ((6-25))
MNLPSTKVSWAAVGGGGSLV-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 332 for 47 contacts (7.1/contact) +
2D Compatibility (PS) -2093 + (NN) -446 + (LL) 1676
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -2481.0 ( -52.79 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1UVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UVQ-query.scw
PDB file :
Tito_Scwrl_1UVQ.pdb
: