Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
4N65 Chain:B ((2-210))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFV------QYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEG---------DSCDEAEQRLLALAR--
General information:
TITO was launched using:
RESULT:
Template:
4N65.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117770 for 1546 contacts (-76.2/contact) +
2D Compatibility (PS) -21650 + (NN) -17383 + (LL) 652
1D Compatibility (HY) -25200 + (ID) 9700
Total energy: -191051.0 ( -123.58 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_4N65.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N65-query.scw
PDB file :
Tito_Scwrl_4N65.pdb
: