Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS |
1VCS Chain:A ((6-30)) | -------------SGEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIASGPSSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2255 for 95 contacts (23.7/contact) +
2D Compatibility (PS) -2782 + (NN) -1167 + (LL) 1080
1D Compatibility (HY) 400 + (ID) 200
Total energy: -414.0 ( -4.36 by residue)
QMean score : 0.356
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